popen: decouple logger fd from stderr

The default logger configuration writes logs to stderr.

Popen implementation holds a logger fd until execve() to be able to
write debug entries or information about a failure from a child. However
when popen flags requires to close stderr in the child, the logger fd
becomes closed: logging will fail.

Another problem appears when a user want to capture stderr and
tarantool's log level is set to debug (7). Since the logger uses stderr
and it is fed to the parent using a pipe, the logger output will not
shown on the 'real' stderr, but will be captured together with child's
program debugging output.

This commit duplicates a logger file descriptor that allows to close or
redirect child's stderr without described side effects.

See also 86ec3a5c ('popen: add logging
in child process').

Areas for improvements:

* Copy logger fd at module initialization time instead of copying of
  each popen call.

Alternatives:

* Extend logger to allow to accumulate log entries in a buffer. Flush
  the buffer from the parent process. (It is possible since vfork does
  not split a virtual memory space).

Part of #4031

Acked-by: Cyrill Gorcunov <gorcunov@gmail.com>